Function reference • consensusNetR

Pre-construction

calc_cor_of_cor(): Computing cor of cor between study expression data

compare_networks(): compare_networks

Consensus Network Construction

construct_rbh_overlap_based(): Construct Meta Reciprocal Best Hits based on overlaps

construct_rbh_correlation_based(): Construct Meta Reciprocal Best Hits based on correlations

plot_rbh(): RBH Heatmap Creation

detect_consensus_communities(): Detect Communities in Adjacency/Reciprocal Best Hits Matrix

calc_consensus_memberships(): Compute the average metagene across studies for each community

Downstream Functions

get_gene_community_membership(): Get Consensus Membership of Genes in Metagene Communities

plot_consensus_eig_dist(): Plot individual eigengene distributions